249 Packages in sci-libs

Portage Tree » sci-libs

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A 3D Voronoi cell software library - Versions: (BSD)
Fiona
OGR's neat, nimble, no-nonsense API - Versions: 1.5.1, 1.7.6, 9999 (BSD)
Rtree
R-Tree spatial index for Python GIS - Versions: 0.8.2 (LGPL-2)
Shapely
Geometric objects, predicates, and operations - Versions: 1.5.17, 9999, 1.3.2, 1.3.0, 1.5.17-r1 (BSD)
ViSP
Visual Servoing Platform: visual tracking and visual servoing library - Versions: 3.0.1 (GPL-2)
adolc
Automatic differentiation system for C/C++ - Versions: 2.5.2, 2.5.0, 2.4.1, 2.6.2, 9999, 2.6.3 (|| ( EPL-1.0 GPL-2 ))
alglib
Numerical analysis and data processing library - Versions: 3.8.2-r1, 3.10.0-r1 (GPL-2+)
amd
Library to order a sparse matrix prior to Cholesky factorization - Versions: 2.3.1 (LGPL-2.1)
armadillo
Streamlined C++ linear algebra library - Versions: 8.200.0, 7.800.2-r1, 7.950.1, 6.200.3, 7.950.0 (Apache-2.0)
arpack
Arnoldi package library to solve large scale eigenvalue problems - Versions: 3.4.0, 3.1.5, 3.5.0 (BSD)
arprec
Arbitrary precision float arithmetics and functions - Versions: 2.2.18 (BSD)
atlas
Automatically Tuned Linear Algebra Software - Versions: 3.10.2 (BSD)
avogadrolibs
Advanced molecule editor and visualizer 2 - libraries - Versions: 0.9.0, 0.8.0, 0.7.2-r1 (BSD GPL-2+)
beagle
Open BEAGLE, a versatile EC/GA/GP framework - Versions: 3.0.3-r1 (LGPL-2.1)
blas-reference
Basic Linear Algebra Subprograms F77 reference implementations - Versions: 20161223, 20070226-r4, 20151113-r1 (BSD)
bliss
Compute Automorphism Groups and Canonical Labelings of Graphs - Versions: 0.73-r1 (LGPL-3)
bmrblib
API abstracting the BioMagResBank (BMRB) NMR-STAR format (http://www.bmrb.wisc.edu/) - Versions: 1.0.3 (GPL-3)
btf
Algorithm for matrix permutation into block triangular form - Versions: 1.2.0, 1.1.3 (LGPL-2.1)
buddy
Binary Decision Diagram Package - Versions: 2.4-r1 (buddy)
camd
Library to order a sparse matrix prior to Cholesky factorization - Versions: 2.3.1 (LGPL-2.1)
cbflib
Library providing a simple mechanism for accessing CBF files and imgCIF files - Versions: 0.9.3.3 (GPL-2)
cblas-reference
C wrapper interface to the F77 reference BLAS implementation - Versions: 20030223-r6, 20161223, 20151113-r2 (public-domain)
ccfits
C++ interface for cfitsio - Versions: 2.4-r1, 2.5 (BSD)
ccolamd
Constrained Column approximate minimum degree ordering algorithm - Versions: 2.8.0 (LGPL-2.1)
ccpn-data
The Collaborative Computing Project for NMR - Data - Versions: 2.4.1, 2.3.1_p140425, 2.4.2, 2.4.0_p140425 (|| ( CCPN LGPL-2.1 ))
cctbx
Computational Crystallography Toolbox - Versions: 2010.03.29.2334-r7 (cctbx-2.0)
cddlib
C implementation of the Double Description Method of Motzkin et al - Versions: 094g, 094h (GPL-2)
cdf
Common Data Format I/O library for multi-dimensional data sets - Versions: 3.5.0.2, 3.4.1 (CDF)
ceres-solver
Nonlinear least-squares minimizer - Versions: 1.11.0, 1.12.0 (sparse? ( BSD ) !sparse? ( LGPL-2.1 ) cxsparse? ( BSD ))
cfitsio
C and Fortran library for manipulating FITS files - Versions: 3.360, 3.39, 3.410, 3.38-r1 (MIT)
cgcode
Conjugate gradient Codes for large sparse linear systems - Versions: 1.0-r2 (GPL-2)
cgnslib
The CFD General Notation System (CGNS) is a standard for CFD data - Versions: 3.2.1, 3.3.0 (ZLIB)
chemkit
Library for chemistry applications - Versions: 0.1-r1 (BSD PSF-2.2)
cholmod
Sparse Cholesky factorization and update/downdate library - Versions: 2.1.2 (minimal? ( LGPL-2.1 ) !minimal? ( GPL-2 ))
cifparse-obj
Provides an object-oriented application interface to information in mmCIF format - Versions: 7.025-r1, 7.105 (PDB)
clapack
f2c'ed version of LAPACK - Versions: 3.2.1-r8 (BSD)
clashscore-db
Clashscore-db for clashlist - Versions: 3.17 (richardson)
clblas
Library containing BLAS routines for OpenCL - Versions: 2.10 (Apache-2.0)
clblast
Tuned OpenCL BLAS - Versions: 0.10.0 (Apache-2.0)
clipper
Object-oriented libraries for crystallographic data and computation - Versions: 2.1.20140911-r1 (LGPL-2.1)
cln
Class library (C++) for numbers - Versions: 1.3.3, 1.3.4 (GPL-2)
cminpack
C implementation of the MINPACK nonlinear optimization library - Versions: 1.3.4, 1.3.5 (minpack)
cmpfit
MINPACK-1 Least Squares Fitting Library in C - Versions: 1.2-r1 (public-domain minpack)
coinhsl
HSL mathematical software library for IPOPT - Versions: 2014.01.10 (HSL)
coinor-alps
COIN-OR Framework for implementing parallel graph search algorithms - Versions: 1.5.4, 1.4.9 (CPL-1.0)
coinor-bcp
COIN-OR Branch-Cut-Price Framework - Versions: 1.3.8 (CPL-1.0)
coinor-bcps
COIN-OR BiCEPS data handling library - Versions: 0.93.10 (CPL-1.0)
coinor-blis
COIN-OR BiCePS Linear Integer Solver - Versions: 0.93.10 (CPL-1.0)
coinor-bonmin
COIN-OR Basic Open-source Nonlinear Mixed INteger programming - Versions: 1.7.4 (CPL-1.0)
coinor-cbc
COIN-OR Branch-and-Cut Mixed Integer Programming Solver - Versions: 2.8.9 (EPL-1.0)
coinor-cgl
COIN-OR cutting-plane generators library - Versions: 0.58.6 (EPL-1.0)
coinor-clp
COIN-OR Linear Programming solver - Versions: 1.15.6-r1 (EPL-1.0)
coinor-couenne
COIN-OR Convex Over and Under ENvelopes for Nonlinear Estimation - Versions: 0.4.7 (EPL-1.0)
coinor-cppad
COIN-OR C++ Algorithmic Differentiation - Versions: 20140519, 20140519-r1, 20140204 (GPL-3)
coinor-csdp
COIN-OR C Library for Semi-Definite Programming - Versions: 6.1.1-r1 (CPL-1.0)
coinor-dip
COIN-OR Decomposition in Integer Programming library - Versions: 0.9.8 (EPL-1.0)
coinor-dylp
COIN-OR using the dynamic simplex linear programming solver - Versions: 1.9.4 (EPL-1.0)
coinor-flopcpp
COIN-OR algebraic modeling language for linear optimization - Versions: 1.1.7 (EPL-1.0)
coinor-mp
COIN-OR lightweight API for COIN-OR libraries CLP, CBC, and CGL - Versions: 1.7.6 (EPL-1.0)
coinor-netlib
COIN-OR netlib models - Versions: 1.2.6 (EPL-1.0)
coinor-os
COIN-OR Optimization Services - Versions: 2.10.1 (EPL-1.0)
coinor-osi
COIN-OR Open Solver Interface - Versions: 0.106.6 (EPL-1.0)
coinor-sample
COIN-OR Sample models - Versions: 1.2.9 (EPL-1.0)
coinor-smi
COIN-OR Stochastic modelling interface - Versions: 0.93.4 (CPL-1.0)
coinor-symphony
COIN-OR solver for mixed-integer linear programs - Versions: 5.5.7 (EPL-1.0)
coinor-utils
COIN-OR Matrix, Vector and other utility classes - Versions: 2.9.11 (EPL-1.0)
coinor-vol
COIN-OR Volume algorithm linear programming solver - Versions: 1.4.4 (EPL-1.0)
colamd
Column approximate minimum degree ordering algorithm - Versions: 2.8.0 (LGPL-2.1)
colpack
C++ algorithms for specialized vertex coloring problems - Versions: 1.0.10, 1.0.6, 1.0.9-r1 (GPL-3 LGPL-3)
coot-data-3
Data for the Crystallographic Object-Oriented Toolkit - Versions: (GPL-3)
cqrlib
Utility library for quaternion arithmetic / rotation math (ANSI C implemented) - Versions: 1.1.3 (LGPL-2.1)
cxsparse
Extended sparse matrix package - Versions: 3.1.1, 2.2.1, 3.1.2-r1, 2.2.6 (LGPL-2.1)
dcmtk
The DICOM Toolkit - Versions: 3.6.0 (OFFIS)
deap
Novel evolutionary computation framework - Versions: 1.0.1, 0.9.1, 1.0.0 (LGPL-3)
djbfft
Extremely fast library for floating-point convolution - Versions: 0.76-r2 (public-domain)
dlib
Numerical and networking C++ library - Versions: 19.4 (Boost-1.0)
dmlc-core
Common bricks library for building distributed machine learning. - Versions: 0_p20170719 (Apache-2.0)
dsdp
Software for interior-point for semidefinite programming - Versions: 5.8-r3 (BSD)
exodusii
Model developed to store and retrieve transient data for finite element analyses - Versions: 6.09, 6.02 (BSD)
fcl
The Flexible Collision Library - Versions: 0.3.2, 0.5.0, 0.4.0, 9999 (BSD)
fetk
The Finite Element ToolKit - Meta package - Versions: 1.5 (GPL-2)
fftw
Fast C library for the Discrete Fourier Transform - Versions: 3.3.4, 3.3.5-r1, 3.3.5-r2, 9999, 3.3.6_p2, 2.1.5-r9, 3.3.6_p1, 2.1.5-r8 (GPL-2+)
flann
Fast approximate nearest neighbor searches in high dimensional spaces - Versions: 9999, 1.9.1, 1.8.4-r1 (BSD)
fplll
Different implementations of the floating-point LLL reduction algorithm - Versions: 4.0.4 (LGPL-2+)
freesteam
Open source implementation of IF97 steam tables - Versions: 2.0, 9999 (GPL-2)
galib
Library for genetic algorithms in C++ programs - Versions: 2.4.7-r1 (BSD examples? ( GPL-2 ))
gamer
Geometry-preserving Adaptive MeshER - Versions: 1.5-r2 (GPL-2)
gaul-devel
Genetic Algorithm Utility Library - Versions: 0.1849-r1, 0.1849-r2 (GPL-2)
gdal
Translator library for raster geospatial data formats (includes OGR support) - Versions: 2.0.2-r3, 2.0.3 (BSD Info-ZIP MIT)
geos
Geometry engine library for Geographic Information Systems - Versions: 3.6.2, 3.6.1 (LGPL-2.1)
gerris
Gerris Flow Solver - Versions: 20131206-r1 (GPL-2)
getdata
Reference implementation of the Dirfile, format for time-ordered binary data - Versions: 0.9.0, 0.9.0-r1, 0.8.5 (LGPL-2.1)
gpp4
A standalone, drop-in replacement for the CCP4 library - Versions: 1.3.1 (GPL-2)
grib_api
Library for decoding WMO FM-92 GRIB messages - Versions: 1.11.0, 1.14.5 (Apache-2.0)
gsl
The GNU Scientific Library - Versions: 2.4, 1.16, 2.1, 2.3 (GPL-3)
gts
GNU Triangulated Surface Library - Versions: 20121130 (LGPL-2)
h5hut
High-Performance I/O Library for Particle-based Simulations - Versions: 1.99.13 (BSD)
h5part
Portable High Performance Parallel Data Interface to HDF5 - Versions: 1.6.6 (BSD)
hdf
General purpose library and format for storing scientific data - Versions: 4.2.11, 4.2.8, 4.2.13, 4.2.9 (NCSA-HDF)
hdf5
General purpose library and file format for storing scientific data - Versions: 1.8.18 (NCSA-HDF)
htslib
C library for high-throughput sequencing data formats - Versions: 1.5 (MIT)
hypre
Parallel matrix preconditioners library - Versions: 2.9.0b, 2.11.1 (LGPL-2.1)
idlcoyote
GDL library from D. Fannings IDL courses - Versions: 20161220, 99999999 (BSD GPL-2)
idlmarkwardt
Craig Markwardt IDL procedures (MPFIT, CMSVLIB, etc) - Versions: 20160319, 20130418 (Markwardt)
ignition-math
A small, fast, and high performance math library for robot applications - Versions: 3.2.0 (Apache-2.0)
inchi
A program and library for generating standard and non-standard InChI and InChIKeys - Versions: 1.04 (IUPAC-InChi)
indilib
INDI Astronomical Control Protocol library - Versions: 1.3.1, 1.4.1 (LGPL-2)
io_lib
General purpose trace and experiment file reading/writing interface - Versions: 1.12.5, 1.11.2.1, 1.10.1, 1.14.7, 1.13.2 (BSD)
ipopt
Interior-Point Optimizer for large-scale nonlinear optimization - Versions: 3.11.7, 3.11.8 (EPL-1.0 hsl? ( HSL ))
ipp
Intel Integrated Performance Primitive library for multimedia and data processing - Versions: 7.1.0.079, 7.1.1.146, 7.1.1.192, 7.1.1.117, 8.0.1.080, 8.2.0.090, 8.2.2.187, 8.2.1.164 (Intel-SDP)
itpp
C++ library of mathematical, signal processing and communication - Versions: 4.3.1-r1 (GPL-3)
jama
Java-like matrix C++ templates - Versions: 1.2.5 (public-domain)
jmol-acme
Portions of the Acme collection required for jMol - Versions: 1.0 (BSD-2)
kim-api
Application Programming Interface for atomistic simulations - Versions: 1.8.2 (CDDL)
klu
Sparse LU factorization for circuit simulation - Versions: 1.2.1 (LGPL-2.1)
lapack-reference
FORTRAN reference implementation of LAPACK Linear Algebra PACKage - Versions: 3.2.1-r4, 3.6.0, 3.7.0 (BSD)
ldl
Simple but educational LDL^T matrix factorization algorithm - Versions: 2.1.0, 2.0.4 (LGPL-2.1)
lemon
C++ template static library of common data structures and algorithms - Versions: 1.3-r2 (Boost-1.0)
levmar
Levenberg-Marquardt nonlinear least squares C library - Versions: 2.6 (GPL-2)
libaec
Adaptive Entropy Coding library - Versions: 1.0.0, 0.3.2, 1.0.1 (BSD-2)
libbufr
ECMWF BUFR library - includes both C and Fortran example utilities - Versions: 000405 (LGPL-3)
libccd
Library for collision detection between two convex shapes - Versions: 2.0, 9999 (BSD)
libccp4
The CCP4 C and F77 subroutine library - Versions: 6.4.6 (GPL-3 LGPL-3)
libcerf
library that provides an efficient and accurate implementation of complex error functions - Versions: 1.4, 1.3 (MIT)
libcmatrix
lite version of pNMRsim - Versions: 3.11.0-r1 (all-rights-reserved)
libcore
Robust numerical and geometric computation library - Versions: 2.1.1-r1 (QPL-1.0)
libctl
Guile-based library for scientific simulations - Versions: 3.2, 3.1 (GPL-2)
libdap
Implementation of a C++ SDK for DAP 2.0 and 3.2 - Versions: 3.18.1 (|| ( LGPL-2.1 URI ))
libexcelformat
reading, writing, and editing of XLS (BIFF8 format) files using C++ - Versions: 101016 (CPOL)
libgenome
Library for sci-biology/mauve - Versions: 1.3-r1 (GPL-2)
libgeodecomp
An auto-parallelizing library to speed up computer simulations - Versions: 0.3.1 (Boost-1.0)
libgeotiff
Library for reading TIFF files with embedded tags for geographic information - Versions: 1.4.1, 1.4.0 (GPL-2)
libghemical
Chemical quantum mechanics and molecular mechanics - Versions: 3.0.0 (GPL-2)
libh2o
Library of routines for IF97 water & steam properties - Versions: 0.2.1, 9999 (BSD)
libh2oxx
C++ bindings for libh2o - Versions: 9999, 0.2 (BSD)
libint
Matrix elements (integrals) evaluation over Cartesian Gaussian functions - Versions: 1.1.6, 2.0.5 (GPL-2)
libmems
Library for sci-biology/mauve - Versions: 1.6_p1-r3, 9999 (GPL-2)
libmuscle
Library for sci-biology/mauve - Versions: 3.7-r3 (public-domain)
libnova
Celestial Mechanics and Astronomical Calculation Library - Versions: 0.12.3, 0.14.0, 0.15.0 (LGPL-2)
liborigin
Library for reading OriginLab OPJ project files - Versions: 20110829 (GPL-3)
libpdb
PDB Record I/O Libraries -- c version - Versions: 991112-r1 (BSD)
libqalculate
A modern multi-purpose calculator library - Versions: 0.9.9, 0.9.7-r1 (GPL-2)
libsc
Support for parallel scientific applications - Versions: 9999, 2.0, 1.0-r1, 1.1-r1 (LGPL-2.1+)
libsigrok
basic hardware drivers for logic analyzers and input/output file format support - Versions: 0.4.0, 0.5.0, 9999, 0.3.0 (GPL-3)
libsigrokdecode
provide (streaming) protocol decoding functionality - Versions: 0.4.0, 0.3.0, 9999, 0.5.0, 0.4.1 (GPL-3)
libspatialindex
General framework for developing spatial indices - Versions: 1.8.5-r1, 1.8.1 (MIT)
libsvm
Library for Support Vector Machines - Versions: 3.22, 3.21 (BSD)
libticables2
Library to handle different link cables for TI calculators - Versions: 1.3.5, 1.3.4, 1.3.3-r1 (GPL-2)
libticalcs2
Library for communication with TI calculators - Versions: 1.1.9, 1.1.8 (GPL-2)
libticonv
Charset conversion library for TI calculators - Versions: 1.1.5, 1.1.4 (GPL-2)
libtifiles2
Library for TI calculator files - Versions: 1.1.7, 1.1.6-r1 (GPL-2)
linux-gpib
Kernel module and driver library for GPIB (IEEE 488.2) hardware - Versions: 4.1.0 (GPL-2)
lis
Library of Iterative Solvers for Linear Systems - Versions: 1.6.5 (BSD)
lrslib
self-contained ANSI C implementation of the reverse search algorithm - Versions: 042c-r2, 062, 051, 042c-r1 (GPL-2)
magma
Matrix Algebra on GPU and Multicore Architectures - Versions: 1.4.1, 1.4.0 (BSD)
mathgl
Math Graphics Library - Versions: 2.3.4 (LGPL-3)
matio
Library for reading and writing matlab files - Versions: 1.5.10, 1.5.2, 1.5.1 (BSD-2)
mc
2D/3D AFEM code for nonlinear geometric PDE - Versions: 1.5 (GPL-2)
metis
A package for unstructured serial graph partitioning - Versions: 5.1.0-r2, 4.0.3, 5.1.0-r3 (Apache-2.0)
minfx
Numerical optimisation library - Versions: 1.0.3-r1, 1.0.4_pre98, 1.0.10, 1.0.11, 1.0.5, 1.0.4, 1.0.6 (GPL-3)
minuit
A C++ physics analysis tool for function minimization - Versions: 5.34.14 (GPL-2)
mkl
Intel(R) Math Kernel Library: linear algebra, fft, math functions - Versions: 10.0.5.025-r1, 10.0.5.025 (Intel-SDP)
mmdb
The Coordinate Library, designed to assist CCP4 developers in working with coordinate files - Versions: 1.25.5-r1, 2.0.1 (GPL-2 LGPL-3)
mmtk
Molecular Modeling ToolKit for Python - Versions: 2.7.9 (CeCILL-2)
monomer-db
Monomer library used for macromolecular structure building and refinement - Versions: 5.41 (LGPL-3)
mpfi
Multiple precision interval arithmetic library based on MPFR - Versions: 1.5.1 (GPL-2)
mpir
Library for arbitrary precision integer arithmetic (fork of gmp) - Versions: 3.0.0, 2.6.0-r2, 2.7.2 (LGPL-3)
mumps
MUltifrontal Massively Parallel sparse direct matrix Solver - Versions: 4.10.0-r1 (public-domain)
naga
Simplified Java NIO asynchronous sockets - Versions: 2.1 (MIT)
nanoflann
C++ header-only library for Nearest Neighbor (NN) search wih KD-trees - Versions: 1.2.3, 9999 (BSD)
neartree
Function library efficiently solving the Nearest Neighbor Problem - Versions: 5.1.1 (LGPL-2.1)
nemesis
Enhancement to the EXODUSII finite element database model - Versions: 5.24, 6.09 (BSD)
netcdf
Scientific library and interface for array oriented data access - Versions: 4.4.1.1, 4.4.0-r1, 4.3.2-r1 (UCAR-Unidata)
netcdf-cxx
C++ library for netCDF - Versions: 4.2-r300, 4.2.1, 4.2.1-r1 (UCAR-Unidata)
netcdf-fortran
Scientific library and interface for array oriented data access - Versions: 4.4.3, 4.4.2, 4.2 (UCAR-Unidata)
nfft
library for nonequispaced discrete Fourier transformations - Versions: 3.3.2 (GPL-2)
nlopt
Non-linear optimization library - Versions: 2.4.2-r1 (LGPL-2.1 MIT)
o2scl
Object-oriented Scientific Computing Library - Versions: 0.920 (GPL-3)
oc
Network Data Access Protocol client C library - Versions: 2.0 (LGPL-2)
octomap
An Efficient Probabilistic 3D Mapping Framework Based on Octrees - Versions: 1.8.1, 9999 (BSD qt4? ( GPL-2 ))
ogdi
Open Geographical Datastore Interface, a GIS support library - Versions: 3.1.5-r1, 3.2.0_beta2 (GPL-2)
opencascade
Development platform for CAD/CAE, 3D surface/solid modeling and data exchange - Versions: 6.9.0-r1, 6.8.0-r1, 6.7.1-r1, 6.9.1-r1, 6.9.1-r2 (|| ( Open-CASCADE-LGPL-2.1-Exception-1.0 LGPL-2.1 ))
openfoam
Open Field Operation and Manipulation - CFD Simulation Toolbox - Versions: 2.3.0-r1, 2.2.1, 2.3.1-r1, 2.2.2, 2.4.0-r1 (GPL-2)
openfoam-bin
Open Field Operation and Manipulation - CFD Simulation Toolbox - Versions: 1.6 (GPL-2)
openlibm
High quality system independent, open source libm - Versions: 0.5.4 (public-domain MIT ISC BSD-2 LGPL-2.1+)
orocos-bfl
Bayesian Filtering Library - Versions: 0.8.0 (LGPL-2.1)
orocos_kdl
Kinematics and Dynamics Library (KDL) - Versions: 9999, 1.3.1-r1 (LGPL-2.1)
p4est
Scalable Algorithms for Parallel Adaptive Mesh Refinement on Forests of Octrees - Versions: 9999, 2.0, 1.1, 1.0 (GPL-2+)
parmetis
Parallel graph partitioner - Versions: 3.2.0 (free-noncomm)
parmgridgen
Software for parallel (mpi) generating coarse grids - Versions: 1.0 (all-rights-reserved)
pastix
Parallel solver for very large sparse linear systems - Versions: 5.2.3, 5.2.2.22-r1 (CeCILL-C)
pcl
2D/3D image and point cloud processing - Versions: 1.8.0, 9999, 1.8.1 (BSD)
pgplot
FORTRAN/C device-independent scientific graphic library - Versions: 5.2.2-r6, 5.2.2-r7 (free-noncomm)
plotmm
Plot widget for GTKmm - Versions: 0.1.2 (GPL-2)
plplot
Multi-language scientific plotting library - Versions: 5.11.1-r1, 5.12.0-r1 (LGPL-2)
primegen
Small, fast library to generate primes in order - Versions: 0.97-r2, 0.97-r1 (public-domain)
profnet
Neural network architecture for profacc - Versions: 1.0.22 (GPL-3)
profphd-utils
Additional utils for profphd - Versions: 1.0.10, 1.0.10-r1 (GPL-3)
proj
Proj.4 cartographic projection software - Versions: 4.9.2, 4.8.0 (MIT)
punc
Portable Understructure for Numerical Computing - Versions: 1.5 (GPL-2)
pycifrw
Reading and writing CIF (Crystallographic Information Format) files - Versions: 4.1.1, 3.6.2 (ASRP)
pymmlib
Toolkit and library for the analysis and manipulation of macromolecular structural models - Versions: 1.2.1 (Artistic)
pyshp
Pure Python read/write support for ESRI Shapefile format - Versions: 1.2.0, 9999 (MIT)
qd
Quad-double and double-double float arithmetics - Versions: 2.3.17 (BSD)
qfits
ESO stand-alone C library offering easy access to FITS files - Versions: 6.2.0 (GPL-2)
qrupdate
Library for updating of QR and Cholesky decompositions - Versions: 1.1.2-r1 (GPL-3)
rosetta-db
Essential database for rosetta - Versions: 3.4 (rosetta)
rosetta-fragments
Fragment library for rosetta - Versions: 3.1-r1 (rosetta)
rtabmap
Real-Time Appearance-Based Mapping (RGB-D Graph SLAM) - Versions: 0.13.2, 0.14.0, 9999 (BSD)
scalapack
Subset of LAPACK routines redesigned for heterogenous (MPI) computing - Versions: 2.0.2 (BSD)
scikits
Common files for python scikits - Versions: 0.1-r1 (BSD)
scikits_image
Image processing routines for SciPy - Versions: 0.11.3, 0.13.0, 0.12.3 (BSD)
scikits_learn
Python modules for machine learning and data mining - Versions: 0.18.1, 0.19.0, 0.17, 0.18.2, 0.18.2-r1, 0.17.1 (BSD)
scikits_optimization
Python module for numerical optimization - Versions: 0.3 (BSD)
scikits_timeseries
SciPy module for manipulating, reporting, and plotting time series - Versions: 0.91.3-r1 (BSD eGenixPublic-1.1)
scipy
Scientific algorithms library for Python - Versions: 0.19.1, 0.18.1, 0.16.1, 9999 (BSD LGPL-2)
scotch
Software for graph, mesh and hypergraph partitioning - Versions: 6.0.4-r1, 6.0.4, 6.0.4-r2, 6.0.0, 5.1.12b (CeCILL-2)
shapelib
Library for manipulating ESRI Shapefiles - Versions: 1.4.0-r1 (GPL-2 LGPL-2)
shogun
Large Scale Machine Learning Toolbox - Versions: 5.0.0 (GPL-3 free-noncomm)
silo
A mesh and field I/O library and scientific database - Versions: 4.9.1, 4.10.2 (BSD)
spooles
SParse Object Oriented Linear Equations Solver - Versions: 2.2 (public-domain)
spqr
Multithreaded multifrontal sparse QR factorization library - Versions: 1.3.1, 1.2.3-r1 (GPL-2)
spr
Statistical analysis and machine learning library - Versions: 3.3.2 (GPL-2)
ssm
A macromolecular coordinate superposition library - Versions: 1.4 (GPL-3 LGPL-2.1)
starparse
Library for parsing NMR star files (peak-list format) and CIF files - Versions: 1.0-r1 (GPL-2)
suitesparse
Meta package for a suite of sparse matrix tools - Versions: 4.2.1, 4.0.2 (LGPL-2.1 GPL-2)
suitesparseconfig
Common configurations for all packages in suitesparse - Versions: 4.2.1, 4.2.1-r1 (LGPL-2.1)
sundials
Suite of nonlinear solvers - Versions: 2.7.0 (BSD)
superlu
Sparse LU factorization library - Versions: 4.3-r1, 5.2.1-r1 (BSD)
superlu_mt
Multithreaded sparse LU factorization library - Versions: 3.1 (BSD)
symengine
Fast symbolic manipulation library, written in C++ - Versions: 0.3.0-r1 (MIT)
szip
Extended-Rice lossless compression algorithm implementation - Versions: 2.1-r2, 2.1 (szip)
ta-lib
Technical Analysis Library for analyzing financial markets trends - Versions: 0.4.0 (BSD)
tamu_anova
ANOVA Extensions to the GNU Scientific Library - Versions: 0.2.1 (GPL-2)
taucs
C library of sparse linear solvers - Versions: 2.2 (LGPL-2.1)
tnt
Template Numerical Toolkit: C++ headers for array and matrices - Versions: 1.2.6, 3.0.12 (public-domain)
udunits
Library for manipulating units of physical quantities - Versions: 2.1.24-r1, 2.2.20 (UCAR-Unidata)
ufconfig
Common configuration scripts for the SuiteSparse libraries - Versions: 3.5.0, 3.7.1, 3.7.0, 3.6.1 (LGPL-2.1)
umfpack
Unsymmetric multifrontal sparse LU factorization library - Versions: 5.6.2 (GPL-2)
vecmath-objectclub
Unofficial free implementation of Sun javax.vecmath by Kenji Hiranabe - Versions: 1.14 (HPND)
votca-moo
Votca Molecular orbital library - Versions: 9999 (Apache-2.0)
votca-tools
Votca tools library - Versions: 9999, 1.4.1, 1.4 (Apache-2.0)
vtk
The Visualization Toolkit - Versions: 6.1.0-r4, 7.0.0, 6.1.0-r3, 7.1.0 (BSD LGPL-2)
vtkdata
Example data file for VTK - Versions: 6.0.0, 6.1.0 (BSD)
xdmf2
eXtensible Data Model and Format - Versions: 1.0_p141226-r2, 1.0_p141226-r1 (VTK)
xdrfile
Library to read gromacs trajectory and topology files - Versions: 1.1.1 (LGPL-3)
xgks-pmel
PMEL fork of XGKS, an X11-based version of the ANSI Graphical Kernel System - Versions: 2.5.5 (UCAR-Unidata)
xkaapi
Kernel for Adaptative, Asynchronous Parallel and Interactive programming - Versions: 2.2, 2.1, 3.0.3 (CeCILL-2)
xylib
Experimental x-y data reading library - Versions: 1.1, 1.2 (LGPL-2.1)
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